You can calculate the angle between two (planar) molecules, by letting CrystalMaker determine the best-fit lattice plane through each molecule, and then calculating the angle between each plane. This is quite straightforward, and is summarized below:
To calculate the angle between two molecules in a crystal:
Select the atoms in one planar group, using the Arrow, Lasso or Polygon tools.
Calculate the best-fit plane through each molecule.
Repeat steps 1 and 2 for the second molecule.
Choose: Calculate > Angle Between Planes.
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